# Ilumr Pulse Sequence plotting tool

**URL:** <https://resonint.discourse.group/t/ilumr-pulse-sequence-plotting-tool/37>\
**Category:** General\
**Tags:** tools\
**Created:** [March 8, 2024, 4:01am UTC](https://resonint.discourse.group/t/ilumr-pulse-sequence-plotting-tool/37 "2024-03-08T04:01:15Z")\
**Posts on this page:** 1\
**Showing post:** 3

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**Author:** ![Cameron](https://yyz1.discourse-cdn.com/flex029/user_avatar/resonint.discourse.group/cameron/32/43_2.png) [@Cameron](https://resonint.discourse.group/u/Cameron)\
**Post date:** [November 4, 2024, 1:58am UTC](https://resonint.discourse.group/t/ilumr-pulse-sequence-plotting-tool/37/3 "2024-11-04T01:58:23Z")

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Step by step instructions for installing the pulse sequence plotting environment using JupyterLab Desktop:

1. Download and install jupyterlab desktop: [GitHub - jupyterlab/jupyterlab-desktop: JupyterLab desktop application, based on Electron.](https://github.com/jupyterlab/jupyterlab-desktop?tab=readme-ov-file#installation)

2. Download and extract: [https://drive.google.com/file/d/1Nj1z2MdtH8sTMAPwfETBY01Ef6jsFkDU/view?usp=sharing](https://drive.google.com/file/d/1Nj1z2MdtH8sTMAPwfETBY01Ef6jsFkDU/view?usp=sharing)

3. Open jupyterlab desktop

4. Top right menu-\>Manage Python Environments  

5. Settings-\>Install bundled (if not already) then tick “Use bundled Python…”  

6. Close both jupyterlab windows and reopen jupyterlab desktop

7. Top right menu-\>Manage Python Environments

8. Create New

9. Check “New Environment”

10. Name: sequence\_plotting

11. Type: conda

12. Uncheck “Include jupyterlab”

13. Additional Python packages: “jupyterlab==3.6.8 panel==1.4.5 numpy==1.26.4 PyYAML==5.4.1 pyzmq==26.2.0 scipy==1.11.4 zerorpc-python==0.6.3 msgpack-python==1.1.0 msgpack-numpy==0.4.8 matplotlib==3.9.2 pandas==2.3.3”

14. Create  

15. When finished close “Manage Python Environments” window

16. New session…

17. Environment menu-\>conda: sequence\_plotting  

18. Navigate to sequence\_plotting directory in file browser and open notebooks-\>plot\_RARE\_example.ipynb  

19. Run-\>Run All Cells  

If all is successful, you should see the waveforms of the RARE sequence plotted as seen above. The bokeh warnings may be ignored.

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